I could be way off and this could be a stupid comment, but I always understood the ratio of the rocker to be the differential of the imput-pushrods for how far it pushes down across the fulcrum on the valve. So the pushrod pushes up 1 unit and pushes down 1.49.
From my understanding from what you are describing with the lowered deck you have changed the lift of the pushrod (in essence lengthened the pushrod with a shorter deck)
It would be more akin to a different lift or larger lobe on a cam swap.
I don't think it would change the rocker ratio, but might affect the overall lift or increase the opening of the valves.
Or that is a guess and I am a noob-either would be accurate, and I will defer to one of the guru engine builders.
Mike Rizzo
1963 F100 "Rudy"
Daniel Island, SC