I think this question can be answered in different ways. I use studs when ever I can so I’m more familiar with those, however like Ted, I check the threads in the holes with either one. I have a thread cleaner kit (these are not taps) and it’s what I check for the depths of the threads also. I’m more concerned with the proper amount of threads in the hole to make for a more secure attachment. When I know the treads are good and there is a sufficient number of them I like to use a hardened washer for a better distribution of torque to a larger diameter surface mating with the cylinder head and under side of the bolt head. I also use those dental hooks to reach down in the block to count threads. I assume nothing. I also had to grind flat the impact socket I used for torquing the bolt heads on the car.
With our stock engines this probably a little over kill but I’m pretty annal with stock engines because I’ve so many racing ones and check all the same things on each. I’m not an engine builder so none of my customers can come back. I’m the only one. A good stock engine may have its heads off 2 maybe 3 times in its life but my racing engine 10 to 20 or more so that’s why I really like studs.
The key is to take your time and check every thing you can. Look at each piece before assembly, have a book or manual on what your working on. I have three Ford Y-Block assembly books and this my first one since 1961. To me it’s so easy to get things wrong that I’ll read before doing anything today so I don’t miss a step. Ted and Tim McMaster are just a phone call away when I’m confused and need a quick answer. I don’t take their time and try to very specific on what I need and I know they know exactly what to do. I’m 78 now and it’s getting harder but I love to do it. Good luck
56 Vic, B'Ville 200 MPH Club Member, So Cal.