Mark MB - If the ported vacuum source on the carb (the one you described on the primary metering block) is providing vacuum all of the time - then the primary throttle blade is too far open. That causes the "port" for ported vacuum to be perpetually open - and trouble with idle transfer - the hesitation you mention.
The primary blade needs to be accurately positioned on the idle transfer slot to make both functions work properly. If you can't keep the engine running with the blade positioned as shown below, you will need to open up the secondary blades slightly to provide more air. There is some fuel available there - and you will make up the rest with the mixture screws on the primary.

There was a time when - if you couldn't get enough air with the primary blade in the right spot - guys would resort to drilling holes in it for additional air passage. Don't. There is a provision in most vacuum secondary Holleys to "stop" the rear throttle shaft with a hidden adjustment screw. It is on the passenger side immediate;ly behind the throttle rod exit from the base plate.

I have learned that making the screw adjustable with the carb mounted - isn't the easiest thing - but it is worth working out. My hillbilly solution is to replace it with a piece of machine screw ("all thread") that protrudes out the bottom, and you can then turn it with needle nose pliers. Other ways work - and may be more sanitary - but my way does work (at midnight when the hardware store is closed).
When the primary blade is properly located, and you have the idle speed controlled - set the two mixture screws for best vacuum. and go from there. Make sure your timing is set before you quit adjusting the mixture.
Steve Metzger Tucson, Arizona