Ditto on Charlie’s comments. Here’s more on the subject.
I typically use 9.775” as a starting point but it’s simply a starting point. Most Y’s end up around 9.755” when I’m through with them. The deck spec for the scrub engine is 9.025” and most rotating assemblies for this engine are designed for a 9.000” deck so shops will arbitrarily just cut the decks to that. If wanting to deck the block without actually dry assembling the crank, rods, and pistons into the block, then you can measure the crankshaft stroke, rod length, and piston pin compression height and, in theory, get there using these values.
(Crankshaft stroke / 2) + rod length + compression height = top of piston or deck height if zero decking. If you want the piston 0.005” in the hole, then you’d simply add 0.005” to the formula.
It’s then up to your machinist to accurately locate crankshaft centerline and put these numbers to use.
I still dry assemble every engine to check the actual deck height and then mill the decks accordingly. I recommend this over doing a blind cut. It’s not unusual for the decks to be lopp-jawed and require different amounts of cut from one end of the deck to the other. Be cognizant that connecting rod lengths as well as crankshaft strokes throughout the various journals have been known to vary so this has to be checked and taken into account regardless of the method used to measure the deck height.

Lorena, Texas (South of Waco)